Date limit
25-01-2026
Institution
Barcelona Supercomputing Center (BSC)
About BSC
The Barcelona Supercomputing Center - Centro Nacional de Supercomputación (BSC-CNS) is the leading supercomputing center in Spain. It houses MareNostrum, one of the most powerful supercomputers in Europe, was a founding and hosting member of the former European HPC infrastructure PRACE (Partnership for Advanced Computing in Europe), and is now hosting entity for EuroHPC JU, the Joint Undertaking that leads large-scale investments and HPC provision in Europe. The mission of BSC is to research, develop and manage information technologies in order to facilitate scientific progress. BSC combines HPC service provision and R&D into both computer and computational science (life, earth and engineering sciences) under one roof, and currently has over 1000 staff from 60 countries.
We are particularly interested for this role in the strengths and lived experiences of women and underrepresented groups to help us avoid perpetuating biases and oversights in science and IT research. In instances of equal merit, the incorporation of the under-represented sex will be favoured.
We promote Equity, Diversity and Inclusion, fostering an environment where each and every one of us is appreciated for who we are, regardless of our differences.
If you consider that you do not meet all the requirements, we encourage you to continue applying for the job offer. We value diversity of experiences and skills, and you could bring unique perspectives to our team.
We are particularly interested for this role in the strengths and lived experiences of women and underrepresented groups to help us avoid perpetuating biases and oversights in science and IT research. In instances of equal merit, the incorporation of the under-represented sex will be favoured.
We promote Equity, Diversity and Inclusion, fostering an environment where each and every one of us is appreciated for who we are, regardless of our differences.
If you consider that you do not meet all the requirements, we encourage you to continue applying for the job offer. We value diversity of experiences and skills, and you could bring unique perspectives to our team.
Context And Mission
The Technologies for Biomedical Research Lab (TechBioLab) within the Life Sciences Department of the Barcelona Supercomputing Center (BSC) brings together specialised teams to enable research activities in the Life Sciences. These teams cover a range of areas, including research data and software, infrastructure for centralized and federated analysis and learning, etc. From a technical perspective, TechBioLab’s activities focus on developing infrastructures that support Life Sciences research, including software components for bioinformatics, research data management– especially in healthcare–and scientific and technical benchmarking of research software in close collaboration with various communities and projects. Special attention is given to technological developments enabling the analysis of sensitive data in federated settings. This approach facilitates the generation of AI models without requiring data to be moved from its original site. Complementing these efforts, the lab also contributes to the development of Trusted Research Environments that enable the use of research data on single sites under specific, configurable usage conditions.
The laboratory coordinates the Spanish National Bioinformatics Institute (INB). The Spanish National Bioinformatics Institute (INB) is the major bioinformatics platform in Spain and the Spanish node of ELIXIR. ELIXIR (European Life Science Infrastructure for Biological Information) is a pan-European organization founded in 2014 which aims to integrate and harmonize European bioinformatics infrastructures. ELIXIR coordinates the participation of more than 22 countries; engages with other strategic European initiatives and projects, e.g. ESFRI, Research Data Alliance, EUDat and EGI; promotes specific training activities and workshops on ELIXIR resources, partners with industry, and play a key role in shaping the bioinformatics landscape. Within ELIXIR, the INB is responsible for the bioinformatics infrastructure offered by Spain and, therefore, should guarantee its alignment with the strategic areas put forward by ELIXIR.
Since 2018, the INB has two overarching objectives: deepen the alignment of its activities with ELIXIR, and increase the translational impact of INB actions towards the Spanish National Health System (SNS). For the latter objective, the INB has created and supports TransBioNet (Translational Bioinformatics Network), which aims to structure, bring together and work with bioinformatics groups in healthcare settings with a particular focus on the Health Research Institutes (IIS) recognized by the ISCIII.
The INB coordinates the Data Science programme within the Spanish Infrastructure for Personalized Medicine associated with Science and Technology (IMPaCT in Spanish), which aims to establish an interoperable framework for biomedical data integration and analysis, addressing questions from clinicians through the implementation of computing systems in health environments. This programme will prepare clinical data in Spain for secondary use, including medical imaging, structured and non-structured clinical data and genomics, considering all the legal provisions for each possible use and setting. This programme will involve the liaison with diverse stakeholders, including hospitals, the ISCIII, companies in the biomedical sector, the Spanish Medicines Agency and biomedical researchers, among others. All developments will be aligned with the European initiatives in the area, including those from ELIXIR, 1+Million Genomes, the Global Alliance for Genomics and Health and data-sharing projects such as FAIR4Health, HealthyCloud and TEHDAS. In 2023 the INB, the Spanish Node of ELIXIR, renovated its portfolio of bioinformatics resources, including platforms, databases, individual tools and web-services. This portfolio, known as Service Delivery Plan (SDP), constitutes the scientific-technical contribution of Spain to ELIXIR.
The candidate will join a dynamic Life Sciences department team, working in the highly cooperative, multidisciplinary, distributed context of ELIXIR and INB (Spanish National Bioinformatics Institute/ELIXIR-ES) and related national initiatives, such as TransBioNet.
OpenEBench (https://openebench.bsc.es), an initiative developed within ELIXIR, aims to provide a permanent platform to support community-led scientific benchmarking activities and the technical monitoring of research software in Life Sciences. OpenEBench provides, on the one hand, support to scientific communities to perform a critical evaluation of the scientific performance of methods and tools in specific domains. On the other hand, OpenEBench maintains a Tools Monitoring section, holding updated metadata for bioinformatics tools extracted from data sources like bio.tools, Bioconda, and Galaxy, among others, and providing live analysis of several metrics regarding availability, documentation or license availability, among others. The ultimate goal of OpenEBench is to provide an observatory of the quality of the Life Sciences research software, which can provide an overall view of the field and support the generation of development best practices and their progressive adoption.
The laboratory coordinates the Spanish National Bioinformatics Institute (INB). The Spanish National Bioinformatics Institute (INB) is the major bioinformatics platform in Spain and the Spanish node of ELIXIR. ELIXIR (European Life Science Infrastructure for Biological Information) is a pan-European organization founded in 2014 which aims to integrate and harmonize European bioinformatics infrastructures. ELIXIR coordinates the participation of more than 22 countries; engages with other strategic European initiatives and projects, e.g. ESFRI, Research Data Alliance, EUDat and EGI; promotes specific training activities and workshops on ELIXIR resources, partners with industry, and play a key role in shaping the bioinformatics landscape. Within ELIXIR, the INB is responsible for the bioinformatics infrastructure offered by Spain and, therefore, should guarantee its alignment with the strategic areas put forward by ELIXIR.
Since 2018, the INB has two overarching objectives: deepen the alignment of its activities with ELIXIR, and increase the translational impact of INB actions towards the Spanish National Health System (SNS). For the latter objective, the INB has created and supports TransBioNet (Translational Bioinformatics Network), which aims to structure, bring together and work with bioinformatics groups in healthcare settings with a particular focus on the Health Research Institutes (IIS) recognized by the ISCIII.
The INB coordinates the Data Science programme within the Spanish Infrastructure for Personalized Medicine associated with Science and Technology (IMPaCT in Spanish), which aims to establish an interoperable framework for biomedical data integration and analysis, addressing questions from clinicians through the implementation of computing systems in health environments. This programme will prepare clinical data in Spain for secondary use, including medical imaging, structured and non-structured clinical data and genomics, considering all the legal provisions for each possible use and setting. This programme will involve the liaison with diverse stakeholders, including hospitals, the ISCIII, companies in the biomedical sector, the Spanish Medicines Agency and biomedical researchers, among others. All developments will be aligned with the European initiatives in the area, including those from ELIXIR, 1+Million Genomes, the Global Alliance for Genomics and Health and data-sharing projects such as FAIR4Health, HealthyCloud and TEHDAS. In 2023 the INB, the Spanish Node of ELIXIR, renovated its portfolio of bioinformatics resources, including platforms, databases, individual tools and web-services. This portfolio, known as Service Delivery Plan (SDP), constitutes the scientific-technical contribution of Spain to ELIXIR.
The candidate will join a dynamic Life Sciences department team, working in the highly cooperative, multidisciplinary, distributed context of ELIXIR and INB (Spanish National Bioinformatics Institute/ELIXIR-ES) and related national initiatives, such as TransBioNet.
OpenEBench (https://openebench.bsc.es), an initiative developed within ELIXIR, aims to provide a permanent platform to support community-led scientific benchmarking activities and the technical monitoring of research software in Life Sciences. OpenEBench provides, on the one hand, support to scientific communities to perform a critical evaluation of the scientific performance of methods and tools in specific domains. On the other hand, OpenEBench maintains a Tools Monitoring section, holding updated metadata for bioinformatics tools extracted from data sources like bio.tools, Bioconda, and Galaxy, among others, and providing live analysis of several metrics regarding availability, documentation or license availability, among others. The ultimate goal of OpenEBench is to provide an observatory of the quality of the Life Sciences research software, which can provide an overall view of the field and support the generation of development best practices and their progressive adoption.
Key Duties
- Take the lead on the design and implementation of the OpenEBench visual interfaces.
- Develop, document and maintain research software for the integration and biological data, following the guidelines of ELIXIR.
- Maintain communication with ELIXIR platforms, communities, and management, and participate in regular meetings and discussions.
- Contribute to supervising technical developments of junior members at the TechBioLab.
Requirements
- Education
- BSc or MSc degrees in Bioinformatics, Computational Biology, Computer Sciences or Multimedia Engineering with relevant experience in the development of visual interfaces.
- Essential Knowledge and Professional Experience
- At least 2 years of professional experience with a similar role.
- At least 2 years of experience with web-development framework like Vue.JS, Angular, React or similar.
- At least 2 years of User-Centered Design experience.
- Experience in database design and management (SQL and noSQL): MySQL/MariaDB, PostgreSQL, SQLite or similar; MongoDB, ElasticSearch, Cassandra or similar.
- Experience with advanced software packaging procedures.
- Experience in software quality management.
- Experience working with Unix/Linux systems.
- Additional Knowledge and Professional Experience
- Experience in developing, generating and using software containers, e.g. Docker, Singularity and/or rkt, and their orchestration using docker compose, Kubernetes, ansible and/or similar technologies.
- Experience in developing project technical specifications.
- Fluency in English, written and spoken.
- At least basic knowledge of Spanish.
- Competences
- Ability to understand scientific literature and software documentation.
- Ability to communicate scientific results.
- Ability to work independently and in coordination with other internal and external team members.
- Ability to represent the team in international project meetings.
- Used to work under pressure under strict deadlines.
Conditions
- The position will be located at BSC within the Life Sciences Department
- We offer a full-time contract (37.5h/week), a good working environment, a highly stimulating environment with state-of-the-art infrastructure, flexible working hours, extensive training plan, restaurant tickets, private health insurance, support to the relocation procedures
- Duration: Open-ended contract due to technical and scientific activities linked to the project and budget duration
- Holidays: 22 days of holidays + 6 personal days + 24th and 31st of December per our collective agreement
- Salary: we offer a competitive salary commensurate with the qualifications and experience of the candidate and according to the cost of living in Barcelona
- Starting date: asap
Applications procedure and process
All applications must be submitted via the BSC website (form at the end of the vacancy page) and contain:
- A full CV in English including contact details
- A cover/motivation letter with a statement of interest in English, clearly specifying for which specific area and topics the applicant wishes to be considered. Additionally, two references for further contacts must be included. Applications without this document will not be considered.
Development of the recruitment process
The selection will be carried out through a competitive examination system ("Concurso-Oposición"). The recruitment process consists of two phases:
- Curriculum Analysis: Evaluation of previous experience and/or scientific history, degree, training, and other professional information relevant to the position. - 40 points
- Interview phase: The highest-rated candidates at the curriculum level will be invited to the interview phase, conducted by the corresponding department and Human Resources. In this phase, technical competencies, knowledge, skills, and professional experience related to the position, as well as the required personal competencies, will be evaluated. - 60 points. A minimum of 30 points out of 60 must be obtained to be eligible for the position.
The recruitment panel will be composed of at least three people, ensuring at least 25% representation of women.
In accordance with OTM-R principles, a gender-balanced recruitment panel is formed for each vacancy at the beginning of the process. After reviewing the content of the applications, the panel will begin the interviews, with at least one technical and one administrative interview. At a minimum, a personality questionnaire as well as a technical exercise will be conducted during the process.
The panel will make a final decision, and all individuals who participated in the interview phase will receive feedback with details on the acceptance or rejection of their profile.
At BSC, we seek continuous improvement in our recruitment processes. For any suggestions or comments/complaints about our recruitment processes, please contact recruitment@bsc.es.
For more information, please follow this link.
Deadline
The vacancy will remain open until a suitable candidate has been hired. Applications will be regularly reviewed and potential candidates will be contacted.
OTM-R principles for selection processes
BSC-CNS is committed to the principles of the Code of Conduct for the Recruitment of Researchers of the European Commission and the Open, Transparent and Merit-based Recruitment principles (OTM-R). This is applied for any potential candidate in all our processes, for example by creating gender-balanced recruitment panels and recognizing career breaks etc.
BSC-CNS is an equal opportunity employer committed to diversity and inclusion. We are pleased to consider all qualified applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, disability or any other basis protected by applicable state or local law.
For more information follow this link
BSC-CNS is an equal opportunity employer committed to diversity and inclusion. We are pleased to consider all qualified applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, disability or any other basis protected by applicable state or local law.
For more information follow this link
Original source: https://www.bsc.es/join-us/job-opportunities/326lstbrre2